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Mapping dynamics of subcellular RNA and protein localization and organization using optimal transport

Nature · By Jun Zhu ·

The Brief

  • Researchers introduce SLOT, a computational tool that maps mRNA and protein localisation within cells.
  • The work provides a framework and spatial atlas for studying molecular organisation inside cells.
  • The paper was published online in Nature Communications on 15 November 2026.

Why it matters

It gives cell biologists a computational method for mapping where RNAs and proteins sit inside cells and how that organisation changes, which can inform studies of subcellular organisation.

Who’s affected

  • cell biologists
  • computational biologists working on subcellular localisation
  • #optimal transport
  • #subcellular localization
  • #rna localization
  • #protein localization
  • #spatial atlas

Nature Communications, Published online: 15 November 2026; doi:10.1038/s41467-026-79450-4 The authors introduce a computational tool SLOT to map mRNA and protein localization within cells, providing a framework and spatial atlas for studying molecular organization during early…

Timeline

  1. Published online in Nature Communications

  2. nature.com

    Mapping dynamics of subcellular RNA and protein localization and organization using optimal transport

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    Mapping dynamics of subcellular RNA and protein localization and organization using optimal transport – The Morning Science